PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3NPS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BBAALBAEABBBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H2	10	H2-10-*	-1	GIIPIFGTAN	BBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H3	19	H3-19-*	-1	ARTfhirrYRSGYYDKMDH
B	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	9	ADESTSTA	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV1-47*03	90.9	Hu_IGLV1-47*03	92.3	L1	13	L1-13-1	7	SGSSSNIGSNYVS	BBBAAAAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV1-47*03	90.9	Hu_IGLV1-47*03	87.5	L2	8	L2-8-1	9	YDNNQRPS	BLLABBBB
C	lambda	Homo.sapiens	Hu_IGLV1-47*03	90.9	Hu_IGLV1-47*03	22.2	L3	9	L3-9-4	17	QSRDISQYV	BBBBEABBB
C	lambda	Homo.sapiens	Hu_IGLV1-47*03	90.9	Hu_IGLV1-47*03	100.0	L4	6	L4-6-2	11	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022