PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3NFS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	90.4	Mo_IGHV1-4*02	92.3	H1	13	H1-13-1	10	KASGYTFTSYRMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	90.4	Mo_IGHV1-4*02	90.0	H2	10	H2-10-1	13	YINPSTGYTE	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	90.4	Hu_IGHV1-69*15	100.0	H3	9	H3-9-*	-1	ARGGGVFDY	BBABEBBAB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	90.4	Hu_IGHV1-69*15	87.5	H4	8	H4-8-1	11	ADESTNTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Mo_IGKV4-57*01	90.0	L1	10	L1-10-1	13	SASSSISYMH	BBABBBABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Mo_IGKV4-57*01	87.5	L2	8	L2-8-1	9	YTTSNLAS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	28.6	L3	9	L3-9-cis7-1	14	HQRSTYPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	10	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022