PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3MXV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S137*01	91.8	Mo_IGHV1S137*01	76.9	H1	13	H1-13-1	7	KGSGYTFIDEALH	BBBLBBAAABBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S137*01	91.8	Mo_IGHV1S137*01	40.0	H2	10	H2-10-1	9	VIRPYSGETN	BBBAAALBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S137*01	91.8	Mo_IGHV1S137*01	100.0	H3	12	H3-12-*	-1	ARDWERGDFFDY	BBBALAEBBBAB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S137*01	91.8	Mo_IGHV1S137*01	87.5	H4	8	H4-8-1	6	VDISSSTA	BBAAALBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-32*01	98.5	Mo_IGKV6-32*01	81.8	L1	11	L1-11-1	4	KASQSVSNDLT	BBABBAEABBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-32*01	98.5	Mo_IGKV6-32*01	100.0	L2	8	L2-8-1	5	YYASNRYT	BLLABBBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-32*01	98.5	Mo_IGKV6-32*01	85.7	L3	9	L3-9-cis7-1	9	QQDYGSPPT	BBAABBbBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-32*01	98.5	Mo_IGKV6-32*01	100.0	L4	6	L4-6-1	11	GYGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022