PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3MNV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Mo_IGKV8-24*01	94.2	Mo_IGKV8-24*01	82.4	L1	17	L1-17-1	6	KSSQSLlnsrneRNYLA	BBABBABBAAALBBBBB
A	kappa	Homo.sapiens	Mo_IGKV8-24*01	94.2	Mo_IGKV8-24*01	87.5	L2	8	L2-8-1	7	YFASIRES	BLLABBBB
A	kappa	Homo.sapiens	Mo_IGKV8-24*01	94.2	Mo_IGKV8-24*01	71.4	L3	9	L3-9-cis7-1	7	LQHYNTPWT	BBAABBbBB
A	kappa	Homo.sapiens	Mo_IGKV8-24*01	94.2	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	92.3	H1	13	H1-13-1	11	KASGYTFTDYSVH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	100.0	H2	10	H2-10-1	16	WINTETGEPT	BBBAAALBBB
B	heavy	Homo.sapiens	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	50.0	H3	6	H3-6-1	17	ALGWLH	BBEAAB
B	heavy	Homo.sapiens	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	87.5	H4	8	H4-8-1	9	LESSASTA	BBAAALBB
C	kappa	Homo.sapiens	Mo_IGKV8-24*01	94.2	Mo_IGKV8-24*01	82.4	L1	17	L1-17-1	10	KSSQSLlnsrneRNYLA	BBABBABBAAALBBBBB
C	kappa	Homo.sapiens	Mo_IGKV8-24*01	94.2	Mo_IGKV8-24*01	87.5	L2	8	L2-8-1	7	YFASIRES	BLLABBBB
C	kappa	Homo.sapiens	Mo_IGKV8-24*01	94.2	Mo_IGKV8-24*01	71.4	L3	9	L3-9-cis7-1	6	LQHYNTPWT	BBAABBbBB
C	kappa	Homo.sapiens	Mo_IGKV8-24*01	94.2	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	92.3	H1	13	H1-13-1	9	KASGYTFTDYSVH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	100.0	H2	10	H2-10-1	13	WINTETGEPT	BBBAAALBBB
D	heavy	Homo.sapiens	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	50.0	H3	6	H3-6-1	17	ALGWLH	BBEAAB
D	heavy	Homo.sapiens	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	87.5	H4	8	H4-8-1	11	LESSASTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022