PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3MLR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	79.5	Hu_IGHV5-51*01	61.5	H1	13	H1-13-1	7	KSSGYNFLDSWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	79.5	Hu_IGHV5-51*01	70.0	H2	10	H2-10-1	10	IIYPDDSDAH	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	79.5	Hu_IGHV5-51*01	50.0	H3	17	H3-17-*	-1	TRLylfEGAQSSNAFDL
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	79.5	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	8	VDKSISTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	82.1	Hu_IGLV3-1*01	72.7	L1	11	L1-11-4	12	SGDKLDDKYVS	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	82.1	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	7	YQDFKRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	82.1	Hu_IGLV3-1*01	75.0	L3	9	L3-9-*	-1	QAWDASTGV	BBBBBBBBA
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	82.1	Hu_IGLV3-1*01	66.7	L4	6	L4-6-2	9	KSGKTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022