PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3MCL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-9*01	86.3	Mo_IGHV1-9*01	76.9	H1	13	H1-13-1	8	KATGYTFSTSWIE	BBBLBBAAABBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-9*01	86.3	Mo_IGHV1-9*01	70.0	H2	10	H2-10-3	18	EVLPGSGKSN	BBBBLALBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-9*01	86.3	Mo_IGHV1-9*01	100.0	H3	12	H3-12-*	-1	AREGSNNNALAY	BBBBAABABBAB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-9*01	86.3	Mo_IGHV1-9*01	87.5	H4	8	H4-8-1	16	ADTASNTA	BBAAALBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV4-59*01	94.2	Mo_IGKV4-59*01	100.0	L1	10	L1-10-1	10	SASSSVSYMH	BBABBBABBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV4-59*01	94.2	Mo_IGKV4-59*01	75.0	L2	8	L2-8-1	4	YDSSRLAS	BLLABBBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV4-59*01	94.2	Mo_IGKV4-59*01	50.0	L3	8	L3-8-*	-1	QNWRSSPT	BBAABBbA
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV4-59*01	94.2	Mo_IGKV4-59*01	100.0	L4	6	L4-6-1	13	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022