PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3MBX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV8-8*01	94.5	Mo_IGHV8-8*01	93.3	H1	15	H1-15-1	10	SFSGFSLSTYGMgvG	BBBLBBAABBLBBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV8-8*01	94.5	Mo_IGHV8-8*01	77.8	H2	9	H2-9-1	10	HIWWDDVKR	BBBAALBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV8-8*01	94.5	Mo_IGHV8-8*01	66.7	H3	13	H3-13-2	23	ARMGSDYDVWFDY	BBBABAABBBBAB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV8-8*01	94.5	Mo_IGHV8-8*01	75.0	H4	8	H4-8-*	-1	KDTSGSQV	BBAALABB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	88.2	L1	17	L1-17-1	6	KSSQSLlynnnqKNYLA	BBABBABBAAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L3	9	L3-9-cis7-1	6	QQYYSYPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022