PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3LRS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	69.2	H1	13	H1-13-1	9	LASGFTFHKYGMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	60.0	H2	10	H2-10-2	8	LISDDGMRKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H3	30	H3-30-*	-1	AREaggpiwhddvkyydfndgYYNYHYMDV
A	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	71.4	L1	14	L1-14-2	8	NGTSSDVGGfDSVS	BBBAAAAAABBBBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	12	FDVSHRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	44.4	L3	10	L3-10-1	14	SSLTDRSHRI	BBBBAALBBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	10	KSGNTA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	69.2	H1	13	H1-13-1	8	LASGFTFHKYGMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	60.0	H2	10	H2-10-2	11	LISDDGMRKY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H3	30	H3-30-*	-1	AREaggpiwhddvkyydfnDGYYNYHYMDV
C	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	71.4	L1	14	L1-14-2	10	NGTSSDVGGfDSVS	BBBAAAAAABABBB
D	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	11	FDVSHRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	44.4	L3	10	L3-10-1	14	SSLTDRSHRI	BBBBAALBBB
D	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	12	KSGNTA	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	69.2	H1	13	H1-13-1	7	LASGFTFHKYGMH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	60.0	H2	10	H2-10-2	11	LISDDGMRKY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H3	30	H3-30-*	-1	AREaggpiwhddvkyydfnDGYYNYHYMDV
E	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H4	8	H4-8-1	10	RDNSKNTL	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	71.4	L1	14	L1-14-2	10	NGTSSDVGGfDSVS	BBBAAAAAABBBBB
F	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	9	FDVSHRPS	BLEABBBB
F	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	44.4	L3	10	L3-10-1	16	SSLTDRSHRI	BBBBAALBBB
F	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	10	KSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	69.2	H1	13	H1-13-1	10	LASGFTFHKYGMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	60.0	H2	10	H2-10-2	8	LISDDGMRKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H3	30	H3-30-*	-1	AREaggpiwhddvkyydfndgYYNYHYMDV
H	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	71.4	L1	14	L1-14-2	9	NGTSSDVGGfDSVS	BBBAAAAAABABBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	13	FDVSHRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	44.4	L3	10	L3-10-1	11	SSLTDRSHRI	BBBBAALBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.2	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	8	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022