PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3LIZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-6-3*01	95.9	Mo_IGHV5-6-3*01	84.6	H1	13	H1-13-1	9	AASGFTFSSFAMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-6-3*01	95.9	Mo_IGHV5-6-3*01	90.0	H2	10	H2-10-2	7	TINSNGASTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-6-3*01	95.9	Mo_IGHV5-6-3*01	50.0	H3	12	H3-12-*	-1	TRDPAGRAWFAY	BBBBBEAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-6-3*01	95.9	Mo_IGHV5-6-3*01	100.0	H4	8	H4-8-1	6	RDNAKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	94.1	Mo_IGKV14-111*01	90.9	L1	11	L1-11-2	4	KASQDINNYLS	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	94.1	Mo_IGKV14-111*01	87.5	L2	8	L2-8-1	6	YRADRLVD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	94.1	Mo_IGKV14-111*01	85.7	L3	9	L3-9-cis7-1	5	LQYDELPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	94.1	Mo_IGKV14-111*01	100.0	L4	6	L4-6-1	7	GSGQDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022