PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3L95

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	45.5	L1	11	L1-11-1	9	RASQDVSTAVA	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	62.5	L2	8	L2-8-1	6	YSASFLYS	BLEABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	71.4	L3	9	L3-9-2	11	QQFYTTPST	BBAABABBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	92.3	H1	13	H1-13-1	7	AASGFTFSSYWIH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	40.0	H2	10	H2-10-1	11	RINPPNRSNQ	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	100.0	H3	12	H3-12-*	-1	ARGSGFRWVMDY	BBBBABAABBAB
B	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	50.0	H4	8	H4-8-1	8	ADTSKNTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	92.3	H1	13	H1-13-1	12	AASGFTFSSYWIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	40.0	H2	10	H2-10-1	12	RINPPNRSNQ	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	100.0	H3	12	H3-12-*	-1	ARGSGFRWVMDY	BBBBABAABBAB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	50.0	H4	8	H4-8-1	7	ADTSKNTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	45.5	L1	11	L1-11-1	8	RASQDVSTAVA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	62.5	L2	8	L2-8-1	7	YSASFLYS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	71.4	L3	9	L3-9-2	14	QQFYTTPST	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022