PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3KS0

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	100.0	H1	13	H1-13-*	-1	SVTGDSITSGYWN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	88.9	H2	9	H2-9-1	12	YISYGGSTY	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	100.0	H3	11	H3-11-*	-1	ARLFGSYYFDY	BBBBBLBBBBE
H	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	100.0	H4	8	H4-8-1	15	RDTSKNQY	BBAAALBB
J	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L1	14	L1-14-1	11	RSSTGAVTtSNYAN	BBAABBBBAAALBB
J	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L2	8	L2-8-1	14	GGTNKRAP	BLEABBBB
J	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	75.0	L3	9	L3-9-1	13	ALWDSNHLV	BBBBLLBBB
J	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	25	LIGDKA	BBEABB
K	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	100.0	H1	13	H1-13-1	22	SVTGDSITSGYWN	BBBLBBAAABBBB
K	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	88.9	H2	9	H2-9-1	11	YISYGGSTY	BBBAALBBB
K	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	100.0	H3	11	H3-11-*	-1	ARLFGSYYFDY	BBBBBLBBBBE
K	heavy	Mus.musculus	Mo_IGHV3-8*02	97.3	Mo_IGHV3-8*02	100.0	H4	8	H4-8-1	13	RDTSKNQY	BBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L1	14	L1-14-1	15	RSSTGAVTtSNYAN	BBAABBBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L2	8	L2-8-1	18	GGTNKRAP	BLEBBBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	75.0	L3	9	L3-9-1	12	ALWDSNHLV	BBBBLLBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	20	LIGDKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022