PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3KLH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Mus.musculus	Mo_IGKV10-94*01	98.6	Mo_IGKV10-94*01	81.8	L1	11	L1-11-2	9	SASQDISSYLN	BBABBALLBBB
C	kappa	Mus.musculus	Mo_IGKV10-94*01	98.6	Mo_IGKV10-94*01	100.0	L2	8	L2-8-1	19	YYTSSLHS	BLEBBBBB
C	kappa	Mus.musculus	Mo_IGKV10-94*01	98.6	Mo_IGKV10-94*01	85.7	L3	9	L3-9-cis7-1	15	QQYSKFPWT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV10-94*01	98.6	Mo_IGKV10-94*01	100.0	L4	6	L4-6-1	10	GSGTDY	EBEABB
D	heavy	Mus.musculus	Mo_IGHV8-4*01	93.2	Mo_IGHV8-4*01	100.0	H1	15	H1-15-2	26	TFSGFSLSTSgiGVT	BBBLBBAABAABBBB
D	heavy	Mus.musculus	Mo_IGHV8-4*01	93.2	Mo_IGHV8-4*01	100.0	H2	9	H2-9-1	24	TIWWDDDNR	BBBAALBBB
D	heavy	Mus.musculus	Mo_IGHV8-4*01	93.2	Mo_IGHV8-4*01	100.0	H3	15	H3-15-*	-1	AQSAITSvTDSAMDH
D	heavy	Mus.musculus	Mo_IGHV8-4*01	93.2	Mo_IGHV8-4*01	100.0	H4	8	H4-8-1	13	KDTSNNQA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022