PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3KJ6

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-81*01	90.4	Mo_IGHV1-81*01	69.2	H1	13	H1-13-1	20	KASGYIFTDYYIN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	90.4	Mo_IGHV1-81*01	70.0	H2	10	H2-10-*	-1	EIYPGSGNID	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	90.4	Mo_IGHV1-81*01	50.0	H3	6	H3-6-2	24	VRGFGY	BALLAB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	90.4	Mo_IGHV1-81*01	100.0	H4	8	H4-8-1	17	ADKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	94.2	Mo_IGKV14-111*01	100.0	L1	11	L1-11-*	-1	KASQDINSYLS	BBABBBBLBBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	94.2	Mo_IGKV14-111*01	100.0	L2	8	L2-8-1	13	YRANRLVD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	94.2	Mo_IGKV14-111*01	100.0	L3	9	L3-9-cis7-1	10	LQYDEFPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	94.2	Mo_IGKV14-111*01	100.0	L4	6	L4-6-1	24	GSGQDY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022