PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3J93

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-85*01	83.8	Mo_IGHV1-85*01	84.6	H1	13	H1-13-1	11	KASGYTFTNYDMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-85*01	83.8	Mo_IGHV1-85*01	70.0	H2	10	H2-10-*	-1	WIFPGDGSTR	BBBAALAEBB
H	heavy	Mus.musculus	Mo_IGHV1-85*01	83.8	Mo_IGHV1-85*01	100.0	H3	13	H3-13-*	-1	ARRGFHGSYSFAY	BBBABAABABBAB
H	heavy	Mus.musculus	Mo_IGHV1-85*01	83.8	Mo_IGHV1-85*01	75.0	H4	8	H4-8-*	-1	TDKSSSTA	BBBLALBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	81.8	L1	11	L1-11-1	11	KASQDVNTALA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	87.5	L2	8	L2-8-1	12	YSASNRYT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	85.7	L3	9	L3-9-cis7-1	9	QQHYTTPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	23	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022