PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3J3O

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence
H	heavy	Mus.musculus	Mo_IGHV1-54*03	93.2	Mo_IGHV1-54*03	92.3	H1	13	H1-13-*	-1	KASGYAFTNYLIQ
H	heavy	Mus.musculus	Mo_IGHV1-54*03	93.2	Mo_IGHV1-54*03	90.0	H2	10	H2-10-*	-1	VINPGSGGTD
H	heavy	Mus.musculus	Mo_IGHV1-54*03	93.2	Mo_IGHV1-54*03	100.0	H3	13	H3-13-*	-1	ARDFYDYDVGFDY
H	heavy	Mus.musculus	Mo_IGHV1-54*03	93.2	Mo_IGHV1-54*03	75.0	H4	8	H4-8-*	-1	ADKSSSIV
L	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	87.5	L1	16	L1-16-*	-1	SSSQSLvhsngKTYLH
L	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L2	8	L2-8-*	-1	YKVSNRFS
L	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L3	9	L3-9-*	-1	SQSTHVPYT
L	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	83.3	L4	6	L4-6-*	-1	GSGTYF

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022