PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3IY7

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Rattus.norvegicus	Ra_IGKV15S2*01	90.9	Ra_IGKV15S2*01	81.8	L1	11	L1-11-1	16	KASHNINKNLE	BBABBAEABBB
A	kappa	Rattus.norvegicus	Ra_IGKV15S2*01	90.9	Ra_IGKV15S2*01	87.5	L2	8	L2-8-*	-1	YYANNLQT	BLEABBBB
A	kappa	Rattus.norvegicus	Ra_IGKV15S2*01	90.9	Ra_IGKV15S2*01	85.7	L3	8	L3-8-*	-1	YQYNSGHT	BBAAAALB
A	kappa	Rattus.norvegicus	Ra_IGKV15S2*01	90.9	Ra_IGKV15S2*01	100.0	L4	6	L4-6-1	13	GSGTDY	EBEABB
B	heavy	Rattus.norvegicus	Ra_IGHV2-16*01	92.5	Ra_IGHV2-16*01	100.0	H1	13	H1-13-*	-1	TVSGFSLTSYGVS	BBBbBBAAABBBB
B	heavy	Rattus.norvegicus	Ra_IGHV2-16*01	92.5	Ra_IGHV2-16*01	44.4	H2	9	H2-9-1	15	TMWNDGDTD	BBBAALBBB
B	heavy	Rattus.norvegicus	Ra_IGHV2-16*01	92.5	Ra_IGHV2-16*01	100.0	H3	16	H3-16-*	-1	ARSQLpgYNLRGWFVY
B	heavy	Rattus.norvegicus	Ra_IGHV2-16*01	92.5	Ra_IGHV2-16*01	87.5	H4	8	H4-8-1	10	RDSSKSQV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022