PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3IY2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV12-44*01	97.0	Mo_IGKV12-44*01	81.8	L1	11	L1-11-1	16	RATKNIYSYLA	BBABBAEABBB
A	kappa	Mus.musculus	Mo_IGKV12-44*01	97.0	Mo_IGKV12-44*01	75.0	L2	8	L2-8-1	9	HNAKTLTE	BLEABBBB
A	kappa	Mus.musculus	Mo_IGKV12-44*01	97.0	Mo_IGKV12-44*01	85.7	L3	9	L3-9-cis7-2	15	QHHYATPYT	BBABEBbBB
A	kappa	Mus.musculus	Mo_IGKV12-44*01	97.0	Mo_IGKV12-44*01	100.0	L4	6	L4-6-1	12	GSGTQF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1-5*01	80.6	CDRLenMismatch	-1.0	H1	12	H1-12-*	-1	KASGYTFTYWMH
B	heavy	Mus.musculus	Mo_IGHV1-5*01	80.6	Mo_IGHV1-5*01	70.0	H2	10	H2-10-3	26	AIFPGNSDSD	BBBBLALBBB
B	heavy	Mus.musculus	Mo_IGHV1-5*01	80.6	Mo_IGHV1-5*01	100.0	H3	12	H3-12-*	-1	TRKDYGTEVFVY	BBBBAABBBBBB
B	heavy	Mus.musculus	Mo_IGHV1-5*01	80.6	Mo_IGHV1-5*01	62.5	H4	10	H4-10-*	-1	AvtSTSNETA

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022