PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3IY0

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-85*01	68.1	Mo_IGHV1-85*01	76.9	H1	13	H1-13-1	10	GASGYTFTNYDMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-85*01	68.1	Mo_IGHV1-85*01	60.0	H2	10	H2-10-1	17	WIFPGDGSAR	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-85*01	68.1	Mo_IGHV1-85*01	100.0	H3	13	H3-13-*	-1	ARRGFAGAASFAY	BBBABAABABBAB
H	heavy	Mus.musculus	Mo_IGHV1-85*01	68.1	Mo_IGHV1-85*01	25.0	H4	8	H4-8-*	-1	AAAAGGTA	BBBLALBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	88.4	Mo_IGKV6-17*01	63.6	L1	11	L1-11-1	14	KGSQDVNSALA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	88.4	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	12	YSGSNRYS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	88.4	Mo_IGKV6-17*01	85.7	L3	9	L3-9-cis7-1	12	QQHYTTPWT	BBBABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	88.4	Mo_IGKV6-17*01	83.3	L4	6	L4-6-1	32	GGGTDF	ELEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022