PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3IFO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV8-12*01	95.9	Mo_IGHV8-12*01	100.0	H1	15	H1-15-1	9	SFSGFSLSTSGMgvS	BBBLBBAABBLBBBB
A	heavy	Mus.musculus	Mo_IGHV8-12*01	95.9	Mo_IGHV8-12*01	100.0	H2	9	H2-9-1	10	HIYWDDDKR	BBBAALBBB
A	heavy	Mus.musculus	Mo_IGHV8-12*01	95.9	Mo_IGHV8-12*01	66.7	H3	15	H3-15-*	-1	VRRPITpVLVDAMDY
A	heavy	Mus.musculus	Mo_IGHV8-12*01	95.9	Mo_IGHV8-12*01	87.5	H4	8	H4-8-1	8	KDTSRKQV	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	7	RSSQNIihsngNTYLE	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	6	YKVSNRFS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	10	FQGSHVPLT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV8-12*01	95.9	Mo_IGHV8-12*01	100.0	H1	15	H1-15-1	9	SFSGFSLSTSGMgvS	BBBLBBAABBLBBBB
H	heavy	Mus.musculus	Mo_IGHV8-12*01	95.9	Mo_IGHV8-12*01	100.0	H2	9	H2-9-1	10	HIYWDDDKR	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV8-12*01	95.9	Mo_IGHV8-12*01	66.7	H3	15	H3-15-*	-1	VRRPITpVLVDAMDY
H	heavy	Mus.musculus	Mo_IGHV8-12*01	95.9	Mo_IGHV8-12*01	87.5	H4	8	H4-8-1	6	KDTSRKQV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	8	RSSQNIihsngNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	7	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	11	FQGSHVPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022