PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3HNT

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-5*01	94.5	Mo_IGHV1-5*01	76.9	H1	13	H1-13-1	8	KASGYSFTNYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	94.5	Mo_IGHV1-5*01	80.0	H2	10	H2-10-1	9	SIYPGNSDTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	94.5	Mo_IGHV1-5*01	100.0	H3	11	H3-11-*	-1	TRFGNYVPFAY	BBBEbLBBBAB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	94.5	Mo_IGHV1-5*01	100.0	H4	8	H4-8-1	8	AVTSASTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-96*03	91.3	Mo_IGKV10-96*03	81.8	L1	11	L1-11-1	7	RASQDIGSYLN	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV10-96*03	91.3	Mo_IGKV10-96*03	100.0	L2	8	L2-8-1	13	YYTSRLHS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*03	91.3	Mo_IGKV10-96*03	57.1	L3	9	L3-9-cis7-1	15	HQDTKPPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV10-96*03	91.3	Mo_IGKV10-96*03	66.7	L4	6	L4-6-*	-1	GSGTHF	BALABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022