PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3HI6

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	10	AASGFTFSRYVMW	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	60.0	H2	10	H2-10-6	20	YIWPSGGNTY	BBBABLLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	50.0	H3	13	H3-13-*	-1	ASSYDFWSNAFDI	BBBBLEABABBAB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	90.9	L1	11	L1-11-1	5	RASQSIGSYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	6	YAASSLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	100.0	L3	8	L3-8-3	9	QQSYSTPS	BBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
X	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	10	AASGFTFSRYVMW	BBBLBBAAABBBB
X	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	60.0	H2	10	H2-10-2	19	YIWPSGGNTY	BBBAALABBB
X	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	50.0	H3	13	H3-13-*	-1	ASSYDFWSNAFDI	BBBBLEABABBAB
X	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	90.9	L1	11	L1-11-1	6	RASQSIGSYLN	BBABBAEABBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	10	YAASSLQS	BLLABBBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	100.0	L3	8	L3-8-3	10	QQSYSTPS	BBAABBBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022