PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3HC0

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Mo_IGHV1-12*01	76.9	H1	13	H1-13-1	8	KASGYTFTTYYLH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Mo_IGHV1-12*01	50.0	H2	10	H2-10-1	16	WIYPGNVHAQ	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H3	9	H3-9-*	-1	ARSWEGFPY	BBBBLEBAB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H4	8	H4-8-1	8	ADKSTSTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1D-16*02	97.1	Mo_IGKV6-15*01	90.9	L1	11	L1-11-1	3	KASQNVGINVA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1D-16*02	97.1	Mo_IGKV6-15*01	87.5	L2	8	L2-8-1	7	SSASYRYS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1D-16*02	97.1	Hu_IGKV1D-16*02	71.4	L3	9	L3-9-cis7-1	6	QQYDTYPFT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1D-16*02	97.1	Hu_IGKV1D-16*02	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Mo_IGHV1-12*01	76.9	H1	13	H1-13-1	9	KASGYTFTTYYLH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Mo_IGHV1-12*01	50.0	H2	10	H2-10-*	-1	WIYPGNVHAQ	BBBBLBABBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H3	9	H3-9-*	-1	ARSWEGFPY	BBBBLEBAB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H4	8	H4-8-1	5	ADKSTSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1D-16*02	97.1	Mo_IGKV6-15*01	90.9	L1	11	L1-11-1	5	KASQNVGINVA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1D-16*02	97.1	Mo_IGKV6-15*01	87.5	L2	8	L2-8-1	8	SSASYRYS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1D-16*02	97.1	Hu_IGKV1D-16*02	71.4	L3	9	L3-9-cis7-1	7	QQYDTYPFT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1D-16*02	97.1	Hu_IGKV1D-16*02	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022