PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3GO1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	82.2	Hu_IGHV4-59*11	61.5	H1	13	H1-13-4	20	TVSGGPINNAYWT	BBBLBBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	82.2	Hu_IGHV4-59*11	55.6	H2	9	H2-9-1	7	YVYHTGVTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	82.2	Hu_IGHV4-59*11	100.0	H3	16	H3-16-*	-1	AREWAEDgdFGNAFHV
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	82.2	Hu_IGHV4-59*11	50.0	H4	8	H4-8-1	5	IDTSRKQL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	91.0	Hu_IGLV3-25*02	63.6	L1	11	L1-11-4	11	SAEALSNQYAY	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	91.0	Hu_IGLV3-25*02	75.0	L2	8	L2-8-*	-1	YKDTKRPS	BLLABBBA
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	91.0	Hu_IGLV3-25*02	88.9	L3	10	L3-10-1	19	QSADSSGDYV	BBBBAALBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	91.0	Hu_IGLV3-25*02	83.3	L4	6	L4-6-2	8	TSGTTV	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022