PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3GI8

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-69*03	93.4	Mo_IGHV1-69*03	92.3	H1	13	H1-13-1	8	KASGYTFTSYWMY	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-69*03	93.4	Mo_IGHV1-69*03	100.0	H2	10	H2-10-1	10	EIDPSDSYTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-69*03	93.4	Mo_IGHV1-69*03	0.0	H3	17	H3-17-*	-1	ARSPHYygtTYNYPMDY
H	heavy	Mus.musculus	Mo_IGHV1-69*03	93.4	Mo_IGHV1-69*03	100.0	H4	8	H4-8-1	8	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	94.1	L1	17	L1-17-*	-1	KSSQSLlntsnqKNYLA	BBABBABBABLBBBBBB
L	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	100.0	L2	8	L2-8-1	8	YFASTRES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	100.0	L3	9	L3-9-2	15	QQHYSTPYT	BBAABABBB
L	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022