PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3G6A

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV3-9*01	91.0	Hu_IGLV3-9*01	45.5	L1	11	L1-11-3	9	SGDNIGGTFVS	BBBLAAABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-9*01	91.0	Hu_IGLV3-9*01	62.5	L2	8	L2-8-1	11	YDDNDRPS	BLLABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-9*01	91.0	Hu_IGLV3-9*01	37.5	L3	10	L3-10-3	13	GTWDMVTNNV	BBBBAAAEBB
A	lambda	Homo.sapiens	Hu_IGLV3-9*01	91.0	Hu_IGLV3-9*01	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-74*03	95.9	Hu_IGHV3-74*03	76.9	H1	13	H1-13-1	9	AASGFTFNSYWIN	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-74*03	95.9	Hu_IGHV3-74*03	40.0	H2	10	H2-10-2	12	GIAYDSSNTL	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-74*03	95.9	Hu_IGHV3-74*03	100.0	H3	15	H3-15-*	-1	ARGLGAfHWDMQPDY
B	heavy	Homo.sapiens	Hu_IGHV3-74*03	95.9	Hu_IGHV3-74*03	87.5	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	95.9	Hu_IGHV3-74*03	76.9	H1	13	H1-13-1	10	AASGFTFNSYWIN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	95.9	Hu_IGHV3-74*03	40.0	H2	10	H2-10-2	11	GIAYDSSNTL	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	95.9	Hu_IGHV3-74*03	100.0	H3	15	H3-15-*	-1	ARGLGAfHWDMQPDY
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	95.9	Hu_IGHV3-74*03	87.5	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-9*01	91.0	Hu_IGLV3-9*01	45.5	L1	11	L1-11-3	10	SGDNIGGTFVS	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-9*01	91.0	Hu_IGLV3-9*01	62.5	L2	8	L2-8-1	12	YDDNDRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-9*01	91.0	Hu_IGLV3-9*01	37.5	L3	10	L3-10-3	13	GTWDMVTNNV	BBBBAAAEBB
L	lambda	Homo.sapiens	Hu_IGLV3-9*01	91.0	Hu_IGLV3-9*01	100.0	L4	6	L4-6-2	12	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022