PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3G5V

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV14-100*01	98.6	Mo_IGKV14-100*01	72.7	L1	11	L1-11-2	5	HSSQDINSNIG	BBABBALLBBB
A	kappa	Mus.musculus	Mo_IGKV14-100*01	98.6	Mo_IGKV14-100*01	87.5	L2	8	L2-8-1	10	YHGTNLDD	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV14-100*01	98.6	Mo_IGKV14-100*01	100.0	L3	9	L3-9-cis7-1	5	VQYAQFPWT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV14-100*01	98.6	Mo_IGKV14-100*01	100.0	L4	6	L4-6-1	10	GSGADY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV3-2*02	95.8	Mo_IGHV3-2*02	92.9	H1	14	H1-14-1	4	TVTGYSITsDFAWN	BBBLBBAAABEBBB
B	heavy	Mus.musculus	Mo_IGHV3-2*02	95.8	Mo_IGHV3-2*02	77.8	H2	9	H2-9-1	9	YISYSGNTR	BBBAALBBB
B	heavy	Mus.musculus	Mo_IGHV3-2*02	95.8	Mo_IGHV3-2*02	0.0	H3	9	H3-9-*	-1	VTAGRGFPY	BBBABEBAB
B	heavy	Mus.musculus	Mo_IGHV3-2*02	95.8	Mo_IGHV3-2*02	87.5	H4	8	H4-8-1	8	RDTSSNQF	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022