PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3FZU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	CDRLenMismatch	-1.0	H1	15	H1-15-*	-1	AASGFrfTFNNYYMD	BBBLBABBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	50.0	H2	10	H2-10-*	-1	RISSSGDPTW	BBBAALBbBB
C	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	50.0	H3	9	H3-9-*	-1	ASLTTGSDS	BBABBLABB
C	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	87.5	H4	8	H4-8-1	12	RENAKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	72.7	L1	11	L1-11-1	11	RASQDIRYYLN	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	11	YVASSLQS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	71.4	L3	9	L3-9-cis7-1	14	LQVYSTPRT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	11	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	CDRLenMismatch	-1.0	H1	15	H1-15-*	-1	AASGFrfTFNNYYMD	BBBLBABBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	50.0	H2	10	H2-10-*	-1	RISSSGDPTW	BBBAALBbBB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	50.0	H3	9	H3-9-*	-1	ASLTTGSDS	BBABBLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	87.5	H4	8	H4-8-1	10	RENAKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	72.7	L1	11	L1-11-1	8	RASQDIRYYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	14	YVASSLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	71.4	L3	9	L3-9-cis7-1	17	LQVYSTPRT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	11	GSGTEF	EBEABB

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