PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3FN0

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-59*02	79.5	Hu_IGHV4-59*02	76.9	H1	13	H1-13-4	15	TVSGGSMINYYWS	BBBLBBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*02	79.5	Hu_IGHV4-59*02	44.4	H2	9	H2-9-1	11	HIIYGGTTK	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*02	79.5	Hu_IGHV4-59*02	100.0	H3	19	H3-19-*	-1	ARVAigvsgFLNYYYYMDV
H	heavy	Homo.sapiens	Hu_IGHV4-59*02	79.5	Hu_IGHV4-59*02	75.0	H4	8	H4-8-1	11	RDISKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-11*03	98.5	Hu_IGKV3D-11*03	63.6	L1	11	L1-11-1	12	RASQSVGRNLG	BBABBAEAABB
L	kappa	Homo.sapiens	Hu_IGKV3D-11*03	98.5	Hu_IGKV3D-11*03	100.0	L2	8	L2-8-1	8	YDASNRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-11*03	98.5	Hu_IGKV3D-11*03	28.6	L3	9	L3-9-cis7-*	-1	QARLLLPQT	BBEBBBaBA
L	kappa	Homo.sapiens	Hu_IGKV3D-11*03	98.5	Hu_IGKV3D-11*03	83.3	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022