PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3F12

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L1	11	L1-11-1	19	RASQSVSSYLA	BBABBAEAABB
A	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	29	YDASNRAT	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L3	10	L3-10-cis78-1	20	QQRSNWpPWT	BBBABBbbBB
A	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	22	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H1	13	H1-13-1	17	AASGFTFSSYGMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H2	10	H2-10-*	-1	VISYDGSNKY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H3	18	H3-18-*	-1	AKDGkcaggscySGLLDY
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	19	RDNSKNTL	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L1	11	L1-11-1	11	RASQSVSSYLA	BBABBAEAABB
C	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	23	YDASNRAT	BLEABBBB
C	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L3	10	L3-10-cis78-1	14	QQRSNWpPWT	BBAABBbbBB
C	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	31	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H1	13	H1-13-1	21	AASGFTFSSYGMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H2	10	H2-10-*	-1	VISYDGSNKY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H3	18	H3-18-*	-1	AKDGkcaggscySGLLDY
D	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	13	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022