PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3EYV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Hu_IGKV1-33*01	98.6	Mo_IGKV1-117*01	93.8	L1	16	L1-16-1	17	RSSQRIvhsngNTYLE	BBABBABBAALBBBBB
A	kappa	Mus.musculus	Hu_IGKV1-33*01	98.6	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	7	YKVSNRFS	BLLABBBB
A	kappa	Mus.musculus	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	28.6	L3	9	L3-9-cis7-1	21	FQGSHVPFT	BBAABBbBB
A	kappa	Mus.musculus	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
B	heavy	Mus.musculus	Hu_IGHV3-33*03	89.0	Mo_IGHV5-12*02	92.3	H1	13	H1-13-1	10	STSGFTFSDYYMY	BBBLBBAAABBBB
B	heavy	Mus.musculus	Hu_IGHV3-33*03	89.0	Mo_IGHV5-12*02	50.0	H2	10	H2-10-6	19	YMSNVGAITD	BBBABLLBBB
B	heavy	Mus.musculus	Hu_IGHV3-33*03	89.0	Hu_IGHV3-33*03	50.0	H3	12	H3-12-*	-1	ARGTRDGSWFAY	BBBBAALBABAB
B	heavy	Mus.musculus	Hu_IGHV3-33*03	89.0	Hu_IGHV3-33*03	100.0	H4	8	H4-8-1	17	RDNSKNTL	BBAAALBB
H	heavy	Mus.musculus	Hu_IGHV3-33*03	89.0	Mo_IGHV5-12*02	92.3	H1	13	H1-13-1	11	STSGFTFSDYYMY	BBBLBBAAABBBB
H	heavy	Mus.musculus	Hu_IGHV3-33*03	89.0	Mo_IGHV5-12*02	50.0	H2	10	H2-10-6	20	YMSNVGAITD	BBBABLLBBB
H	heavy	Mus.musculus	Hu_IGHV3-33*03	89.0	Hu_IGHV3-33*03	50.0	H3	12	H3-12-*	-1	ARGTRDGSWFAY	BBBBAALBABAB
H	heavy	Mus.musculus	Hu_IGHV3-33*03	89.0	Hu_IGHV3-33*03	100.0	H4	8	H4-8-1	13	RDNSKNTL	BBAAALBB
L	kappa	Mus.musculus	Hu_IGKV1-33*01	98.6	Mo_IGKV1-117*01	93.8	L1	16	L1-16-1	13	RSSQRIvhsngNTYLE	BBABBBBBAALBBBBB
L	kappa	Mus.musculus	Hu_IGKV1-33*01	98.6	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	9	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	28.6	L3	9	L3-9-cis7-1	10	FQGSHVPFT	BBAABBbBB
L	kappa	Mus.musculus	Hu_IGKV1-33*01	98.6	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022