PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3ETB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	84.6	H1	13	H1-13-*	-1	KDSGYAFNSSWMN	BBABABAAABBBB
F	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	90.0	H2	10	H2-10-1	21	RIYPGDGDSN	BBBAAALBBB
F	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H3	12	H3-12-*	-1	ARSGLLRYAMDY	BBBBLLAABBAB
F	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H4	8	H4-8-1	15	ADKSSSTA	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	90.9	L1	11	L1-11-2	26	RASQDIRNYLN	BBAEBALLBBB
F	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	75.0	L2	8	L2-8-1	7	YYTSRLQP	BLEABBBB
F	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	85.7	L3	9	L3-9-cis7-1	24	QQGNTPPWT	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	21	GSGTDY	EEEABB
G	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	84.6	H1	13	H1-13-*	-1	KDSGYAFNSSWMN	BBABABAAABBBB
G	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	90.0	H2	10	H2-10-1	20	RIYPGDGDSN	BBBAAALBBB
G	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H3	12	H3-12-*	-1	ARSGLLRYAMDY	BBBBLLAABBAB
G	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H4	8	H4-8-1	14	ADKSSSTA	BBAAALBB
G	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	90.9	L1	11	L1-11-2	26	RASQDIRNYLN	BBAEBALLBBB
G	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	75.0	L2	8	L2-8-1	7	YYTSRLQP	BLEABBBB
G	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	85.7	L3	9	L3-9-cis7-1	24	QQGNTPPWT	BBAABBbBB
G	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	20	GSGTDY	EEEABB
H	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	84.6	H1	13	H1-13-*	-1	KDSGYAFNSSWMN	BBABABAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	90.0	H2	10	H2-10-1	21	RIYPGDGDSN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H3	12	H3-12-*	-1	ARSGLLRYAMDY	BBBBLLAABBAB
H	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H4	8	H4-8-1	14	ADKSSSTA	BBAAALBB
H	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	90.9	L1	11	L1-11-2	26	RASQDIRNYLN	BBAEBALLBBB
H	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	75.0	L2	8	L2-8-1	7	YYTSRLQP	BLEABBBB
H	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	85.7	L3	9	L3-9-cis7-1	24	QQGNTPPWT	BBAABBbBB
H	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	20	GSGTDY	EEEABB
I	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	84.6	H1	13	H1-13-*	-1	KDSGYAFNSSWMN	BBABABAAABBBB
I	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	90.0	H2	10	H2-10-1	20	RIYPGDGDSN	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H3	12	H3-12-*	-1	ARSGLLRYAMDY	BBBBLLAABBAB
I	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H4	8	H4-8-1	13	ADKSSSTA	BBAAALBB
I	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	90.9	L1	11	L1-11-2	26	RASQDIRNYLN	BBAEBALLBBB
I	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	75.0	L2	8	L2-8-1	7	YYTSRLQP	BLEABBBB
I	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	85.7	L3	9	L3-9-cis7-1	24	QQGNTPPWT	BBAABBbBB
I	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	20	GSGTDY	EEEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022