PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3EFD

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Hu_IGHV3-66*01	94.5	Mo_IGHV1-4*01	38.5	H1	13	H1-13-1	22	AASGFNLSYSSMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Hu_IGHV3-66*01	94.5	Mo_IGHV1-4*01	70.0	H2	10	H2-10-1	20	YISPSYGYTS	BBBAAALBBB
H	heavy	Mus.musculus	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	15	H3-15-*	-1	ARSWEAYwRWSAMDY
H	heavy	Mus.musculus	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	13	ADTSKNTA	BBAAALBB
L	kappa	Mus.musculus	Hu_IGKV1-6*01	100.0	Mo_IGKV6-17*01	72.7	L1	11	L1-11-2	13	RASQSVSSAVA	BBABBALLBBB
L	kappa	Mus.musculus	Hu_IGKV1-6*01	100.0	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	21	YSASSLYS	BLLLBBBB
L	kappa	Mus.musculus	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	14.3	L3	9	L3-9-2	12	QQYSYSLLT	BBBABABBB
L	kappa	Mus.musculus	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022