PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3EAK

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Camelus.dromedarius	Ca_IGHV1S27*01	87.7	CDRLenMismatch	-1.0	H1	16	H1-16-*	-1	AASGgseYSYSTFSLG
A	heavy	Camelus.dromedarius	Ca_IGHV1S27*01	87.7	Ca_IGHV1S27*01	70.0	H2	10	H2-10-*	-1	AIASMGGLTY	BBBBLLLBBB
A	heavy	Camelus.dromedarius	Ca_IGHV1S27*01	87.7	Ca_IGHV1S27*01	0.0	H3	18	H3-18-*	-1	AAVRGYFmrlpSSHNFRY
A	heavy	Camelus.dromedarius	Ca_IGHV1S27*01	87.7	Ca_IGHV1S27*01	87.5	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
B	heavy	Camelus.dromedarius	Ca_IGHV1S27*01	87.7	CDRLenMismatch	-1.0	H1	16	H1-16-*	-1	AASGgseYSYSTFSLG
B	heavy	Camelus.dromedarius	Ca_IGHV1S27*01	87.7	Ca_IGHV1S27*01	70.0	H2	10	H2-10-6	6	AIASMGGLTY	BBBABLLBBB
B	heavy	Camelus.dromedarius	Ca_IGHV1S27*01	87.7	Ca_IGHV1S27*01	0.0	H3	18	H3-18-*	-1	AAVRGYFmrlpSSHNFRY
B	heavy	Camelus.dromedarius	Ca_IGHV1S27*01	87.7	Ca_IGHV1S27*01	87.5	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022