PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3E8U

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV9-1*02	89.0	Mo_IGHV9-1*02	76.9	H1	13	H1-13-1	8	KGSGYTFTHYGIN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	89.0	Mo_IGHV9-1*02	80.0	H2	10	H2-10-1	13	WINTHTGEPI	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	89.0	Mo_IGHV9-1*02	50.0	H3	10	H3-10-*	-1	TRSHRFGLDY	BBBBAABBAB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	89.0	Mo_IGHV9-1*02	87.5	H4	8	H4-8-1	6	LETSANTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	95.5	Mo_IGKV3-4*01	86.7	L1	15	L1-15-1	8	KASQSVDyngdSYLN	BBABBABBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	95.5	Mo_IGKV3-4*01	100.0	L2	8	L2-8-1	5	YAASNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	95.5	Mo_IGKV3-4*01	100.0	L3	9	L3-9-cis7-1	8	QQSNEDPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	95.5	Mo_IGKV3-4*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022