PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3DUS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV8-21*01	92.8	Mo_IGKV8-21*01	76.5	L1	17	L1-17-1	12	KSSQSLfksrnqKNYLA	BBABBABBAAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV8-21*01	92.8	Mo_IGKV8-21*01	100.0	L2	8	L2-8-1	8	YWASTRES	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV8-21*01	92.8	Mo_IGKV8-21*01	100.0	L3	8	L3-8-1	9	KQSYNLRT	BBAABEBB
A	kappa	Mus.musculus	Mo_IGKV8-21*01	92.8	Mo_IGKV8-21*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV7-3*02	100.0	Mo_IGHV7-3*02	100.0	H1	13	H1-13-1	16	ATSGFTFTDYYMS	BBELBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV7-3*02	100.0	Mo_IGHV7-3*02	83.3	H2	12	H2-12-1	16	FIRNKakGYTVE	BBBBAAALLBBB
B	heavy	Mus.musculus	Mo_IGHV7-3*02	100.0	Mo_IGHV7-3*02	100.0	H3	12	H3-12-*	-1	ARDGYYVDAMDY	BBBEAAALBBAB
B	heavy	Mus.musculus	Mo_IGHV7-3*02	100.0	Mo_IGHV7-3*02	100.0	H4	8	H4-8-1	13	RDNSQSIL	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV8-21*01	92.8	Mo_IGKV8-21*01	76.5	L1	17	L1-17-1	13	KSSQSLfksrnqKNYLA	BBABBABBAAALBBBBB
C	kappa	Mus.musculus	Mo_IGKV8-21*01	92.8	Mo_IGKV8-21*01	100.0	L2	8	L2-8-1	9	YWASTRES	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV8-21*01	92.8	Mo_IGKV8-21*01	100.0	L3	8	L3-8-1	9	KQSYNLRT	BBAABEBB
C	kappa	Mus.musculus	Mo_IGKV8-21*01	92.8	Mo_IGKV8-21*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV7-3*02	100.0	Mo_IGHV7-3*02	100.0	H1	13	H1-13-1	17	ATSGFTFTDYYMS	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV7-3*02	100.0	Mo_IGHV7-3*02	83.3	H2	12	H2-12-1	15	FIRNKakGYTVE	BBBBAAALLBBB
D	heavy	Mus.musculus	Mo_IGHV7-3*02	100.0	Mo_IGHV7-3*02	100.0	H3	12	H3-12-*	-1	ARDGYYVDAMDY	BBBEAAALBBAB
D	heavy	Mus.musculus	Mo_IGHV7-3*02	100.0	Mo_IGHV7-3*02	100.0	H4	8	H4-8-1	12	RDNSQSIL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022