PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3DIF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L1	11	L1-11-1	6	KASQDVSTAVA	BBABBAEABBB
A	kappa	Homo.sapiens	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L2	8	L2-8-1	5	YSASYRYT	BLEABBBB
A	kappa	Homo.sapiens	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L3	9	L3-9-cis7-1	10	QQHYSTPWT	BBAABBbBB
A	kappa	Homo.sapiens	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Mo_IGHV1-66*01	95.9	Mo_IGHV1-66*01	100.0	H1	13	H1-13-1	9	KASGYSFTSYYIH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Mo_IGHV1-66*01	95.9	Mo_IGHV1-66*01	80.0	H2	10	H2-10-3	15	WVFPGSGNTK	BBBBEALBBB
B	heavy	Homo.sapiens	Mo_IGHV1-66*01	95.9	Mo_IGHV1-66*01	100.0	H3	12	H3-12-*	-1	ARGNYDRAWFAY	BBBBBEABBLAB
B	heavy	Homo.sapiens	Mo_IGHV1-66*01	95.9	Mo_IGHV1-66*01	100.0	H4	8	H4-8-1	7	ADTSSSTA	BBAAALBB
C	kappa	Homo.sapiens	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L1	11	L1-11-1	6	KASQDVSTAVA	BBABBAEABBB
C	kappa	Homo.sapiens	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L2	8	L2-8-1	5	YSASYRYT	BLLABBBB
C	kappa	Homo.sapiens	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L3	9	L3-9-cis7-1	8	QQHYSTPWT	BBAABBbBB
C	kappa	Homo.sapiens	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Mo_IGHV1-66*01	95.9	Mo_IGHV1-66*01	100.0	H1	13	H1-13-1	8	KASGYSFTSYYIH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Mo_IGHV1-66*01	95.9	Mo_IGHV1-66*01	80.0	H2	10	H2-10-3	12	WVFPGSGNTK	BBBBEALBBB
D	heavy	Homo.sapiens	Mo_IGHV1-66*01	95.9	Mo_IGHV1-66*01	100.0	H3	12	H3-12-*	-1	ARGNYDRAWFAY	BBBBBEABBLAB
D	heavy	Homo.sapiens	Mo_IGHV1-66*01	95.9	Mo_IGHV1-66*01	100.0	H4	8	H4-8-1	8	ADTSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022