PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3DGG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L1	15	L1-15-*	-1	RASKSVStsgySYMH	BBABBAAAAEBBBBB
A	kappa	Homo.sapiens	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L2	8	L2-8-1	5	YLASNLES	BLLABBBB
A	kappa	Homo.sapiens	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	85.7	L3	8	L3-8-*	-1	QHSRELLT	BBAEABBB
A	kappa	Homo.sapiens	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Mo_IGHV1-14*01	97.3	Mo_IGHV1-14*01	100.0	H1	13	H1-13-1	7	KASGYTFTSYVMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Mo_IGHV1-14*01	97.3	Mo_IGHV1-14*01	70.0	H2	10	H2-10-1	10	YINPYNDDTN	BBBAAALBBB
B	heavy	Homo.sapiens	Mo_IGHV1-14*01	97.3	Mo_IGHV1-14*01	100.0	H3	12	H3-12-*	-1	AREDYYGSRWGY	BBBBABLLBBAB
B	heavy	Homo.sapiens	Mo_IGHV1-14*01	97.3	Mo_IGHV1-14*01	100.0	H4	8	H4-8-1	9	SDKSSSTA	BBAAALBB
C	kappa	Homo.sapiens	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L1	15	L1-15-*	-1	RASKSVStsgySYMH	BBABBAAAAEBBBBB
C	kappa	Homo.sapiens	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L2	8	L2-8-1	6	YLASNLES	BLLABBBB
C	kappa	Homo.sapiens	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	85.7	L3	8	L3-8-*	-1	QHSRELLT	BBABEBBB
C	kappa	Homo.sapiens	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Mo_IGHV1-14*01	97.3	Mo_IGHV1-14*01	100.0	H1	13	H1-13-1	7	KASGYTFTSYVMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Mo_IGHV1-14*01	97.3	Mo_IGHV1-14*01	70.0	H2	10	H2-10-1	10	YINPYNDDTN	BBBAAALBBB
D	heavy	Homo.sapiens	Mo_IGHV1-14*01	97.3	Mo_IGHV1-14*01	100.0	H3	12	H3-12-*	-1	AREDYYGSRWGY	BBBBABLLBBAB
D	heavy	Homo.sapiens	Mo_IGHV1-14*01	97.3	Mo_IGHV1-14*01	100.0	H4	8	H4-8-1	8	SDKSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022