PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3D85

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Mo_IGKV5-39*01	98.6	Mo_IGKV5-39*01	100.0	L1	11	L1-11-1	6	RASQSISDYLH	BBABBAEABBB
A	kappa	Homo.sapiens	Mo_IGKV5-39*01	98.6	Mo_IGKV5-39*01	100.0	L2	8	L2-8-1	14	KYASQSIS	BLLABBBB
A	kappa	Homo.sapiens	Mo_IGKV5-39*01	98.6	Mo_IGKV5-39*01	100.0	L3	9	L3-9-cis7-1	13	QNGHSFPFT	BBAABBbBB
A	kappa	Homo.sapiens	Mo_IGKV5-39*01	98.6	Mo_IGKV5-39*01	100.0	L4	6	L4-6-1	9	GSGSDF	EBEABB
B	heavy	Homo.sapiens	Mo_IGHV1-14*01	98.6	Mo_IGHV1-14*01	92.3	H1	13	H1-13-1	10	KASGYTFTSNVMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Mo_IGHV1-14*01	98.6	Mo_IGHV1-14*01	90.0	H2	10	H2-10-1	9	YINPYNDGTK	BBBAAALBBB
B	heavy	Homo.sapiens	Mo_IGHV1-14*01	98.6	Mo_IGHV1-14*01	100.0	H3	8	H3-8-*	-1	ARNWDVAY	BBBAAALB
B	heavy	Homo.sapiens	Mo_IGHV1-14*01	98.6	Mo_IGHV1-14*01	100.0	H4	8	H4-8-1	6	SDKSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022