PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3D69

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV1-51*01	85.3	Hu_IGLV1-51*01	92.3	L1	13	L1-13-*	-1	SGSTSNIGNNYVS	BAEAABAAABBBB
A	lambda	Homo.sapiens	Hu_IGLV1-51*01	85.3	Hu_IGLV1-51*01	75.0	L2	8	L2-8-*	-1	YDVSKRPS	BLEBBBBB
A	lambda	Homo.sapiens	Hu_IGLV1-51*01	85.3	Hu_IGLV1-51*01	55.6	L3	11	L3-11-1	15	AAWDDSLSEFL	BBBBAAALEBB
A	lambda	Homo.sapiens	Hu_IGLV1-51*01	85.3	Hu_IGLV1-51*01	83.3	L4	6	L4-6-2	17	KSGNSA	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	92.3	H1	13	H1-13-*	-1	AASGFTFSTYAMH	BBBLEBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	80.0	H2	10	H2-10-2	19	IISYDGSKKY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H3	13	H3-13-*	-1	ARASIAAARVLDY	BBBBAABAABBAB
B	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H4	8	H4-8-1	16	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	92.3	H1	13	H1-13-1	14	AASGFTFSTYAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	80.0	H2	10	H2-10-2	18	IISYDGSKKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H3	13	H3-13-*	-1	ARASIAAARVLDY	BBBBAABAABBAB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H4	8	H4-8-1	20	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	85.3	Hu_IGLV1-51*01	92.3	L1	13	L1-13-*	-1	SGSTSNIGNNYVS	BBBAABEAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	85.3	Hu_IGLV1-51*01	75.0	L2	8	L2-8-*	-1	YDVSKRPS	BLEBBBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	85.3	Hu_IGLV1-51*01	55.6	L3	11	L3-11-1	15	AAWDDSLSEFL	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	85.3	Hu_IGLV1-51*01	83.3	L4	6	L4-6-2	22	KSGNSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022