PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3CXD

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV10-1*02	98.6	Mo_IGHV10-1*02	92.3	H1	13	H1-13-1	12	AASGFTFNIYAMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV10-1*02	98.6	Mo_IGHV10-1*02	83.3	H2	12	H2-12-1	9	RIRSQsnNYTTY	BBBBAAALLBBB
H	heavy	Mus.musculus	Mo_IGHV10-1*02	98.6	Mo_IGHV10-1*02	50.0	H3	7	H3-7-*	-1	VRQMGDY	BBEALAB
H	heavy	Mus.musculus	Mo_IGHV10-1*02	98.6	Mo_IGHV10-1*02	100.0	H4	8	H4-8-1	9	RDDSQSML	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV12-46*01	97.1	Mo_IGKV12-46*01	90.9	L1	11	L1-11-1	16	RASENIYSFLA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV12-46*01	97.1	Mo_IGKV12-46*01	100.0	L2	8	L2-8-1	8	YAATNLAD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV12-46*01	97.1	Mo_IGKV12-46*01	100.0	L3	9	L3-9-cis7-2	11	QHFWGTPFT	BBABEBbBB
L	kappa	Mus.musculus	Mo_IGKV12-46*01	97.1	Mo_IGKV12-46*01	83.3	L4	6	L4-6-1	13	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022