PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3CVH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-18*01	97.1	Mo_IGHV1-18*01	100.0	H1	13	H1-13-1	11	KASGYTFTDYNMD	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-18*01	97.1	Mo_IGHV1-18*01	100.0	H2	10	H2-10-1	12	DINPNNGGTI	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-18*01	97.1	Mo_IGHV1-18*01	100.0	H3	14	H3-14-*	-1	ARKPYYGNFAWFAY	BBBABBEABBBBAB
H	heavy	Mus.musculus	Mo_IGHV1-18*01	97.1	Mo_IGHV1-18*01	87.5	H4	8	H4-8-1	11	VDKSSSAA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV13-84*01	94.1	Mo_IGKV13-84*01	100.0	L1	11	L1-11-2	5	KASEDIYNRLA	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV13-84*01	94.1	Mo_IGKV13-84*01	100.0	L2	8	L2-8-1	5	SGATSLET	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV13-84*01	94.1	Mo_IGKV13-84*01	100.0	L3	9	L3-9-cis7-1	11	QQYWSTPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV13-84*01	94.1	Mo_IGKV13-84*01	83.3	L4	6	L4-6-1	18	GSRKDY	EBEABB
Q	heavy	Mus.musculus	Mo_IGHV1-18*01	97.1	Mo_IGHV1-18*01	100.0	H1	13	H1-13-1	13	KASGYTFTDYNMD	BBBLBBAAABBBB
Q	heavy	Mus.musculus	Mo_IGHV1-18*01	97.1	Mo_IGHV1-18*01	100.0	H2	10	H2-10-1	12	DINPNNGGTI	BBBAAALBBB
Q	heavy	Mus.musculus	Mo_IGHV1-18*01	97.1	Mo_IGHV1-18*01	100.0	H3	14	H3-14-*	-1	ARKPYYGNFAWFAY	BBBABBEABBBBAB
Q	heavy	Mus.musculus	Mo_IGHV1-18*01	97.1	Mo_IGHV1-18*01	87.5	H4	8	H4-8-1	13	VDKSSSAA	BBAAALBB
R	kappa	Mus.musculus	Mo_IGKV13-84*01	94.1	Mo_IGKV13-84*01	100.0	L1	11	L1-11-2	8	KASEDIYNRLA	BBABBALLBBB
R	kappa	Mus.musculus	Mo_IGKV13-84*01	94.1	Mo_IGKV13-84*01	100.0	L2	8	L2-8-1	13	SGATSLET	BLEABBBB
R	kappa	Mus.musculus	Mo_IGKV13-84*01	94.1	Mo_IGKV13-84*01	100.0	L3	9	L3-9-cis7-1	10	QQYWSTPLT	BBAABBbBB
R	kappa	Mus.musculus	Mo_IGKV13-84*01	94.1	Mo_IGKV13-84*01	83.3	L4	6	L4-6-1	17	GSRKDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022