PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3CLF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-12*01	98.6	Mo_IGHV1-12*01	92.3	H1	13	H1-13-1	7	KASGYRFTSYNMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-12*01	98.6	Mo_IGHV1-12*01	100.0	H2	10	H2-10-1	9	AIYPGNGDTS	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-12*01	98.6	Mo_IGHV1-12*01	100.0	H3	11	H3-11-*	-1	ARGRLSLGFDY	BBBBAAAEBAB
H	heavy	Mus.musculus	Mo_IGHV1-12*01	98.6	Mo_IGHV1-12*01	100.0	H4	8	H4-8-1	6	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	97.1	Mo_IGKV6-15*01	72.7	L1	11	L1-11-1	5	KASQNVGNIIA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	97.1	Mo_IGKV6-15*01	87.5	L2	8	L2-8-1	6	YLASYRYS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	97.1	Mo_IGKV6-15*01	71.4	L3	9	L3-9-cis7-1	6	QQYSSFPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	97.1	Mo_IGKV6-15*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022