PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3CK0

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV10-1*02	91.8	Mo_IGHV10-1*02	92.3	H1	13	H1-13-1	20	AASGFTFNTDAMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV10-1*02	91.8	Mo_IGHV10-1*02	75.0	H2	12	H2-12-1	17	RIRSKGFnfATY	BBBBAAALLBBB
H	heavy	Mus.musculus	Mo_IGHV10-1*02	91.8	Mo_IGHV10-1*02	50.0	H3	11	H3-11-*	-1	VRGRDGEAMDY	BBBBBLBBBAB
H	heavy	Mus.musculus	Mo_IGHV10-1*02	91.8	Mo_IGHV10-1*02	100.0	H4	8	H4-8-1	20	RDDSQSML	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV8-21*01	92.8	Mo_IGKV8-21*01	82.4	L1	17	L1-17-1	21	KSSQNLlhsitrKNYLA	BBABBABBAAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV8-21*01	92.8	Mo_IGKV8-21*01	87.5	L2	8	L2-8-1	10	YWASTRGS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV8-21*01	92.8	Mo_IGKV8-21*01	100.0	L3	8	L3-8-1	23	KQSYNLYT	BBAABEBB
L	kappa	Mus.musculus	Mo_IGKV8-21*01	92.8	Mo_IGKV8-21*01	100.0	L4	6	L4-6-1	18	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022