PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3C09

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Mus.musculus	Mo_IGKV4-55*01	-1.0	Mo_IGKV4-55*01	90.0	L1	10	L1-10-1	18	SASSSVTYMY	BBABBBABBB
B	kappa	Mus.musculus	Mo_IGKV4-55*01	-1.0	Mo_IGKV4-55*01	100.0	L2	8	L2-8-1	14	YDTSNLAS	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV4-55*01	-1.0	Mo_IGKV4-55*01	62.5	L3	9	L3-9-1	15	QQWSSHIFT	BBBBLLBBB
B	kappa	Mus.musculus	Mo_IGKV4-55*01	-1.0	Mo_IGKV4-55*01	83.3	L4	6	L4-6-1	25	GSGTDY	EBEABB
C	heavy	Mus.musculus	Mo_IGHV1S81*01	80.3	Mo_IGHV1S81*01	92.3	H1	13	H1-13-1	15	KASGYTFTSHWMH	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV1S81*01	80.3	Mo_IGHV1S81*01	90.0	H2	10	H2-10-1	15	EFNPSNGRTN	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV1S81*01	80.3	Mo_IGHV1S81*01	0.0	H3	14	H3-14-*	-1	ASRDYDYAGRYFDY	BBBBBBAALBBBBB
C	heavy	Mus.musculus	Mo_IGHV1S81*01	80.3	Mo_IGHV1S81*01	62.5	H4	8	H4-8-1	18	VDTSTNTA	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV1S81*01	80.3	Mo_IGHV1S81*01	92.3	H1	13	H1-13-1	17	KASGYTFTSHWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S81*01	80.3	Mo_IGHV1S81*01	90.0	H2	10	H2-10-1	13	EFNPSNGRTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S81*01	80.3	Mo_IGHV1S81*01	0.0	H3	14	H3-14-*	-1	ASRDYDYAGRYFDY	BBBBBBAALBBBBB
H	heavy	Mus.musculus	Mo_IGHV1S81*01	80.3	Mo_IGHV1S81*01	62.5	H4	8	H4-8-1	15	VDTSTNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	-1.0	Mo_IGKV4-55*01	90.0	L1	10	L1-10-1	24	SASSSVTYMY	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	-1.0	Mo_IGKV4-55*01	100.0	L2	8	L2-8-*	-1	YDTSNLAS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	-1.0	Mo_IGKV4-55*01	62.5	L3	9	L3-9-1	14	QQWSSHIFT	BBBBLLBBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	-1.0	Mo_IGKV4-55*01	83.3	L4	6	L4-6-1	18	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022