PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3BKM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV8-12*01	90.3	Mo_IGHV8-12*01	73.3	H1	15	H1-15-*	-1	SFSGFSIRtsKVGVS	BBBLBBAAAALBBBB
H	heavy	Mus.musculus	Mo_IGHV8-12*01	90.3	Mo_IGHV8-12*01	100.0	H2	9	H2-9-1	9	HIYWDDDKR	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV8-12*01	90.3	Mo_IGHV8-12*01	100.0	H3	17	H3-17-*	-1	ARRGFYGrkyEVNHFDY
H	heavy	Mus.musculus	Mo_IGHV8-12*01	90.3	Mo_IGHV8-12*01	75.0	H4	8	H4-8-1	5	KDTSRDMV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	94.2	Mo_IGKV1-117*01	93.8	L1	16	L1-16-1	7	RSSQSIvhsngHTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	94.2	Mo_IGKV1-117*01	75.0	L2	8	L2-8-1	4	YQVSTRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	94.2	Mo_IGKV1-117*01	71.4	L3	9	L3-9-cis7-1	6	FQASLVPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	94.2	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022