PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3BD4

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	94.1	L1	17	L1-17-1	13	KSSQSLfnsrtrKNYLA	BBABBABBAAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	100.0	L2	8	L2-8-1	8	YWASTRES	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	66.7	L3	9	L3-9-2	11	KQSYYHMYT	BBAABABBB
A	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
B	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	94.1	L1	17	L1-17-1	9	KSSQSLfnsrtrKNYLA	BBABBABBAAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	100.0	L2	8	L2-8-1	6	YWASTRES	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	66.7	L3	9	L3-9-*	-1	KQSYyhmyT
B	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022