PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3B2V

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-30-4*01	95.9	Hu_IGHV4-30-4*01	100.0	H1	15	H1-15-*	-1	TVSGGSISsgDYYWS	EbBLEBABBAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-30-4*01	95.9	Hu_IGHV4-30-4*01	88.9	H2	9	H2-9-*	-1	YIYYSGSTD	BBBBEELBB
H	heavy	Homo.sapiens	Hu_IGHV4-30-4*01	95.9	Hu_IGHV4-30-4*01	100.0	H3	13	H3-13-*	-1	ARVSIFGVGTFDY	BBBAEABBABBAB
H	heavy	Homo.sapiens	Hu_IGHV4-30-4*01	95.9	Hu_IGHV4-30-4*01	100.0	H4	8	H4-8-*	-1	VDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L1	11	L1-11-1	21	RASQSVSSYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L2	8	L2-8-*	-1	YDASNRAT	BEEeBBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	14.3	L3	9	L3-9-cis7-*	-1	HQYGSTPLT	ABAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	83.3	L4	6	L4-6-1	15	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022