PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2ZUQ

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	100.0	L1	17	L1-17-*	-1	KSSQSLlnsrtrKNYLA	BBABBABBABEBBALBB
B	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	100.0	L2	8	L2-8-*	-1	YWASTRES	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	100.0	L3	8	L3-8-1	14	KQSYNLYT	BBAABEBB
B	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	100.0	L4	6	L4-6-1	18	GSGTDF	EEEABB
C	heavy	Mus.musculus	Mo_IGHV5-12-1*01	100.0	Mo_IGHV5-12-1*01	100.0	H1	13	H1-13-1	20	AASGFAFSSYDMS	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV5-12-1*01	100.0	Mo_IGHV5-12-1*01	100.0	H2	10	H2-10-2	22	YISSGGGSTY	BBBAALABBB
C	heavy	Mus.musculus	Mo_IGHV5-12-1*01	100.0	Mo_IGHV5-12-1*01	100.0	H3	12	H3-12-*	-1	ARPDyrsyAMDY
C	heavy	Mus.musculus	Mo_IGHV5-12-1*01	100.0	Mo_IGHV5-12-1*01	100.0	H4	8	H4-8-1	20	RDNAKNTL	BBAAALBB
E	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	100.0	L1	17	L1-17-*	-1	KSSQSLlnsrtrKNYLA	BBABBABBABbBBBlBB
E	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	100.0	L2	8	L2-8-*	-1	YWASTRES	BLLABBBB
E	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	100.0	L3	8	L3-8-1	13	KQSYNLYT	BBAABEBB
E	kappa	Mus.musculus	Mo_IGKV8-21*01	100.0	Mo_IGKV8-21*01	100.0	L4	6	L4-6-1	27	GSGTDF	EBEABB
F	heavy	Mus.musculus	Mo_IGHV5-12-1*01	100.0	Mo_IGHV5-12-1*01	100.0	H1	13	H1-13-*	-1	AASGFAFSSYDMS	BBBLBAEAABBBB
F	heavy	Mus.musculus	Mo_IGHV5-12-1*01	100.0	Mo_IGHV5-12-1*01	100.0	H2	10	H2-10-*	-1	YISSGGGSTY	BBBABLABBB
F	heavy	Mus.musculus	Mo_IGHV5-12-1*01	100.0	Mo_IGHV5-12-1*01	100.0	H3	12	H3-12-*	-1	ARPDYRSYAMDY	BBBBAAALBBAB
F	heavy	Mus.musculus	Mo_IGHV5-12-1*01	100.0	Mo_IGHV5-12-1*01	100.0	H4	8	H4-8-1	15	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022