PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2ZCH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-84*01	82.2	Mo_IGHV1-84*01	92.3	H1	13	H1-13-1	8	KASGYTFTTYYIN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-84*01	82.2	Mo_IGHV1-84*01	50.0	H2	10	H2-10-1	6	RIAPASGTTY	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-84*01	82.2	Mo_IGHV1-84*01	100.0	H3	15	H3-15-*	-1	ARADYGfNSGEAMDY
H	heavy	Mus.musculus	Mo_IGHV1-84*01	82.2	Mo_IGHV1-84*01	87.5	H4	8	H4-8-1	10	VDTSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	97.1	Mo_IGKV3-4*01	93.3	L1	15	L1-15-*	-1	KASQSVDfdgdSYMN	BBABBABBEABBABB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	97.1	Mo_IGKV3-4*01	75.0	L2	8	L2-8-1	7	FAASNLAS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	97.1	Mo_IGKV3-4*01	100.0	L3	9	L3-9-cis7-1	9	QQSNEDPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	97.1	Mo_IGKV3-4*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022