PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2Z91

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV3-1*02	95.8	Mo_IGHV3-1*02	92.9	H1	14	H1-14-1	7	TVTGYSITSgYNWH	BBBLBBAAABEBBB
A	heavy	Mus.musculus	Mo_IGHV3-1*02	95.8	Mo_IGHV3-1*02	77.8	H2	9	H2-9-*	-1	YIHYRGTTN	BBBABABBB
A	heavy	Mus.musculus	Mo_IGHV3-1*02	95.8	Mo_IGHV3-1*02	50.0	H3	9	H3-9-*	-1	ACDDFYSDY	BBBBABEBB
A	heavy	Mus.musculus	Mo_IGHV3-1*02	95.8	Mo_IGHV3-1*02	87.5	H4	8	H4-8-1	15	RDSSKNQF	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV4-59*01	94.1	Mo_IGKV4-59*01	80.0	L1	10	L1-10-1	14	SASSSVSSVH	BBABBBABBB
B	kappa	Mus.musculus	Mo_IGKV4-59*01	94.1	Mo_IGKV4-59*01	87.5	L2	8	L2-8-1	11	YDTSKLPS	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV4-59*01	94.1	Mo_IGKV4-59*01	100.0	L3	9	L3-9-cis7-1	21	QQWSSNPPT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV4-59*01	94.1	Mo_IGKV4-59*01	100.0	L4	6	L4-6-1	13	GSGTSY	EBEABB
C	heavy	Mus.musculus	Mo_IGHV3-1*02	95.8	Mo_IGHV3-1*02	92.9	H1	14	H1-14-1	7	TVTGYSITSgYNWH	BBBLBBAAABEBBB
C	heavy	Mus.musculus	Mo_IGHV3-1*02	95.8	Mo_IGHV3-1*02	77.8	H2	9	H2-9-1	25	YIHYRGTTN	BBBAALBBB
C	heavy	Mus.musculus	Mo_IGHV3-1*02	95.8	Mo_IGHV3-1*02	50.0	H3	9	H3-9-*	-1	ACDDFYSDY	BBBBBLBBB
C	heavy	Mus.musculus	Mo_IGHV3-1*02	95.8	Mo_IGHV3-1*02	87.5	H4	8	H4-8-1	14	RDSSKNQF	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV4-59*01	94.1	Mo_IGKV4-59*01	80.0	L1	10	L1-10-1	15	SASSSVSSVH	BBABBBABBB
D	kappa	Mus.musculus	Mo_IGKV4-59*01	94.1	Mo_IGKV4-59*01	87.5	L2	8	L2-8-1	11	YDTSKLPS	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV4-59*01	94.1	Mo_IGKV4-59*01	100.0	L3	9	L3-9-cis7-1	22	QQWSSNPPT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV4-59*01	94.1	Mo_IGKV4-59*01	100.0	L4	6	L4-6-1	12	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022